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Ovarian Kaleidoscope Database (OKdb)

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Dead/h Box 26 OKDB#: 2353
 Symbols: DDX26 Species: human
 Synonyms: DELETED IN CANCER 1, DICE1|  Locus: 13q14.12-q14.2 in Homo sapiens


For retrieval of Nucleotide and Amino Acid sequences please go to: OMIM Entrez Gene
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General Comment NCBI Summary: DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene is a candidate tumor suppressor gene and located in the critical region of loss of heterozygosity (LOH). It encodes a DEAD box protein, which is highly conserved in evolution, indicating an important cellular function.
General function RNA binding
Comment
Cellular localization Cytoplasmic
Comment
Ovarian function Follicle development
Comment
Expression regulated by
Comment
Ovarian localization Granulosa
Comment Identification of Genes Involved in Apoptosis and Dominant Follicle Development During Follicular Waves in Cattle. Evans AC, et al 2004 hypothesize that granulosa and theca cells from growing dominant follicles, with relatively high intrafollicular concentrations of estradiol, have a greater expression of genes involved in inhibiting apoptosis pathways and lower expression of genes involved in apoptosis pathways than growing subordinate follicles with lower estradiol concentrations. Using the well-characterized bovine dominant follicle model, they collected granulosa and theca cells from individual dominant and the largest subordinate follicle 3 days after initiation of a follicular wave in four animals. Based on ultrasound analysis, both follicle types were in the growth phase at the time of ovariectomy. However, dominant follicles were larger (9.8+/-1.0 versus 7.6+/-0.6 mm in diameter, P<0.05) and had greater intrafollicular concentrations of estradiol ( P<0.05) compared with the largest subordinate follicles. They used bovine cDNA microarrays, which contained a total of 1400 genes including a subset of 53 genes known to be involved in apoptosis pathways, to determine which apoptosis and marker genes from each of the four dominant versus subordinate follicles were potentially differentially expressed. Using a low stringency-screening criterion, 22 genes were identified. Quantitative real-time PCR confirmed that 16 of these genes were differentially expressed. The high intrafollicular concentrations of estradiol in growing dominant follicles were positively associated with enhanced expression of mRNAs in granulosa cells for aromatase, LH receptor, estradiol receptor beta, DICE-1 and MCL-1 compared with granulosa cells from subordinate follicles (all survival-associated genes). In contrast, the relatively low intrafollicular concentrations of estradiol in growing subordinate follicles were positively associated with enhanced expression of mRNAs in granulosa cells for beta glycan, COX-1, TNFalpha, CAD and DRAK-2, and in theca cells for beta glycan, caspase 13, P58(IPK), Apaf-1, BTG-3, and TS-BCLL compared with granulosa or theca cells from dominant follicles (genes that are all associated with cell death and/or apoptosis). These genes may be candidate estradiol target genes and that they may be early markers for the final stages of follicle differentiation and initiation of apoptosis and thus selection of dominant follicles during follicular waves.
Follicle stages Antral, Preovulatory
Comment
Phenotypes
Mutations 0 mutations
Genomic Region show genomic region
Phenotypes and GWAS show phenotypes and GWAS
Links
OMIM (Online Mendelian Inheritance in Man: an excellent source of general gene description and genetic information.)
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created: Jan. 28, 2004, 3:02 p.m. by: hsueh   email:
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last update: Jan. 28, 2004, 3:02 p.m. by: system    email:



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