Ovarian Kaleidoscope Database (OKdb)

Gene Search

Please note that the different criteria are linked by AND function (similar to medline AND search); the more criteria you select, the fewer genes will be found. If you select none of the criteria, all available records will be shown.

KEGG Pathways
(290 maps matched to OKdb genes)

OKDB# Species

Gene name (also searches synonyms and symbols)

Keyword (searches in all comments)

Entrez GeneID

Get a list of genes (by Entrez GeneIDs) (comma separated)

Click on each element for its Gene Ontology definition.

Ovarian Specific Biological Process(es)

Localization - Ovarian cell type(s)

Germ cell development
Germ cell migration
Oogenesis
      Oocyte growth

Follicle development
      Follicle endowment and Nest breakdown
      Initiation of primordial follicle growth
      Primary follicle growth
      Preantral follicle growth
      Antral follicle growth
           Follicle antrum/follicular fluid formation
           Cumulus expansion
Follicle atresia
Steroid metabolism
Ovulation
      Follicle rupture
Oocyte maturation
      Germinal vesicle breakdown
      First polar body extrusion
Early embryo development
Pluripotent cell derivation
Luteinization
Luteolysis
Unknown
Other process(es)

Primordial germ cell
Oocyte
Cumulus cells
Granulosa cells
Theca cells
Luteal cells
Stromal cells
Surface epithelium
Ovarian tumor
Follicular fluid
Other cell(s)
cell specific: Search for genes that are cell specific and are found in one or more cell types ONLY by checking the cell specific box in combination with any one or more of the checkboxes above.

Localization - Follicle stage(s)

Primordial
Primary
Secondary
Antral
Preovulatory
Corpus luteum
Other stage(s)

Expression regulated by
FSH LH / hCG Steroids Growth factors / cytokines Eicosanoids Other factor(s)

Associated Phenotypes
PCO (polycystic ovarian syndrome) POF/POI (premature ovarian failure) Species:
Mutation type		Female fertility status
Keyword

General Molecular Functions / Biological Processes

Ligand
      Hormone
      Cytokine
      Growth factor
Extracellular binding protein
Receptor
     HPMR family: ERROR: module 'urllib' has no attribute 'urlopen'
Cell adhesion molecule
Intracellular protein transport
Channel / pore class transporter
Cytoskeleton and structural proteins
      Tubulin binding
      Actin binding
      Microtubule binding
Cell organization
      Nuclear organization
      Chromosome organization
      Cytoskeleton organization
Cell death / survival
      Apoptosis
      Anti-apoptosis
      Cell cycle
      DNA replication
      Oncogenesis
      Tumor supressor
      Cell proliferation
Intracellular signaling cascade

Metabolism
      Protein biosynthesis
      Protease inhibitor
      Protein metabolism and modification
      Energy pathways
      DNA metabolism
           DNA repair
      RNA metabolism
           RNA processing
Enzyme
      Oxidoreductase
      Transferase
      Hydrolase
           Peptidase / Protease
      Lyase
      Isomerase
      Ligase
Nucleic acid binding
      DNA binding
           Transcription factor
      RNA binding
           Translation factor
Epigenetic modifications
Other function(s)

Cellular component or Other organelle(s)
Chromosome Locus (examples: 2p21, 2p, 2)

Ovarian Kaleidoscope Database (OKDB)

Gene Search

Localization - Follicle stage(s)

Primordial Primary Secondary Antral Preovulatory Corpus luteum Other stage(s)

FSH LH / hCG Steroids Growth factors / cytokines Eicosanoids Other factor(s)

Associated Phenotypes

General Molecular Functions / Biological Processes

Cellular component Extracellular matrix Secreted Plasma membrane Other membrane Cytoplasm Cytoskeleton Mitochondrion Nucleus or Other organelle(s)

Primordial
Primary
Secondary
Antral
Preovulatory
Corpus luteum
Other stage(s)

FSH
LH / hCG
Steroids
Growth factors / cytokines
Eicosanoids
Other factor(s)

Cellular component or Other organelle(s)