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Ovarian Kaleidoscope Database (OKdb)

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poly(A)binding protein nuclear-like 1 OKDB#: 4139
 Symbols: Species: human
 Synonyms: Pabpnl1, Gm1108, ePABP2,  Locus: 8 E1 in Homo sapiens


For retrieval of Nucleotide and Amino Acid sequences please go to: Entrez Gene
Mammalian Reproductive Genetics   Endometrium Database Resource   Orthologous Genes

R-L INTERACTIONS   MGI

DNA Microarrays
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link to BioGPS
General Comment
General function RNA processing
Comment
Cellular localization
Comment
Ovarian function
Comment
Expression regulated by
Comment
Ovarian localization Oocyte
Comment Messenger RNA expression of Pabpnl1 and Mbd3l2 genes in oocytes and cleavage embryos. Biase FH et al. OBJECTIVE: To identify genes specifically expressed in mammalian oocytes using an in silico subtraction, and to characterize the mRNA patterns of selected genes in oocytes, embryos, and adult tissues. DESIGN: Comparison between oocyte groups and between early embryo stages. SETTING: Laboratories of embryo manipulation and molecular biology from Departamento de Gentica (FMRP) and Departamento de Cincias Bsicas (FZEA) - University of So Paulo. SAMPLE(S): Oocytes were collected from slaughtered cows for measurements, in vitro fertilization, and in vitro embryo culture. Somatic tissue, excluding gonad and uterus tissue, was collected from male and female cattle. MAIN OUTCOME MEASURE(S): Messenger RNA levels of poly(A)-binding protein nuclear-like 1 (Pabpnl1) and methyl-CpG-binding domain protein 3-like 2 (Mbd3l2). RESULT(S): Pabpnl1 mRNA was found to be expressed in oocytes, and Mbd3l2 transcripts were present in embryos. Quantification of Pabpnl1 transcripts showed no difference in levels between good- and bad-quality oocytes before in vitro maturation (IVM) or between good-quality oocytes before and after IVM. However, Pabpnl1 transcripts were not detected in bad-quality oocytes after IVM. Transcripts of the Mbd3l2 gene were found in 4-cell, 8-cell, and morula-stage embryos, with the highest level observed in 8-cell embryos. CONCLUSION(S): Pabpnl1 gene expression is restricted to oocytes and Mbd3l2 to embryos. Different Pabpnl1 mRNA levels in oocytes of varying viability suggest an important role in fertility involving the oocyte potential for embryo development.
Follicle stages
Comment
Phenotypes
Mutations 0 mutations
Genomic Region show genomic region
Phenotypes and GWAS show phenotypes and GWAS
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created: Oct. 14, 2009, 3:15 p.m. by: hsueh   email:
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last update: Oct. 14, 2009, 3:16 p.m. by: hsueh    email:



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