KRR1 small subunit processome component homolog | OKDB#: 5268 |
Symbols: | KRR1 | Species: | human | ||
Synonyms: | HRB2, RIP-1 | Locus: | 12q21.2 in Homo sapiens |
For retrieval of Nucleotide and Amino Acid sequences please go to:
OMIM
Entrez Gene
Mammalian Reproductive Genetics Endometrium Database Resource Orthologous Genes UCSC Genome Browser GEO Profiles new! Amazonia (transcriptome data) new! R-L INTERACTIONS MGI |
General Comment |
Dribble, the Drosophila KRR1p homologue, is involved in rRNA processing. Chan HY et al. (2001) The Drosophila dribble (dbe) gene encodes a KH domain protein, homologous to yeast KRR1p. Expression of dbe transcripts is ubiquitous during embryogenesis. Overexpressed Dribble protein is localized in the nucleus and in some cell types in a subregion of the nucleolus. Homozygous dbe mutants die at first instar larval stage. Clonal analyses suggest that dbe(+) is required for survival of dividing cells. In dbe mutants, a novel rRNA-processing defect is found and accumulation of an abnormal rRNA precursor is detected.//////////////////
In yeast, Krr1 is a component of a ribonucleoprotein required for biogenesis of the 18S rRNA.
|
||||
General function | RNA binding | ||||
Comment | |||||
Cellular localization | |||||
Comment | GWAS123//////////////Identifying susceptibility genes for primary ovarian insufficiency on the high-risk genetic background of a fragile X premutation. Trevino CE et al. (2021) To identify modifying genes that explains the risk of fragile X-associated primary ovarian insufficiency (FXPOI). Gene-based, case/control association study, followed by a functional screen of highly ranked genes using a Drosophila model. Participants were recruited from academic and clinical settings. Women with a premutation (PM) who experienced FXPOI at the age of 35 years or younger (n = 63) and women with a PM who experienced menopause at the age of 50 years or older (n = 51) provided clinical information and a deoxyribonucleic acid sample for whole genome sequencing. The functional screen was on the basis of Drosophila TRiP lines. Clinical information and a DNA sample were collected for whole genome sequencing. A polygenic risk score derived from common variants associated with natural age at menopause was calculated and associated with the risk of FXPOI. Genes associated with the risk of FXPOI were identified on the basis of the P-value from gene-based association test and an altered level of fecundity when knocked down in the Drosophila PM model. The polygenic risk score on the basis of common variants associated with natural age at menopause explained approximately 8% of the variance in the risk of FXPOI. Further, SUMO1 and KRR1 were identified as possible modifying genes associated with the risk of FXPOI on the basis of an untargeted gene analysis of rare variants. In addition to the large genetic effect of a PM on ovarian function, the additive effects of common variants associated with natural age at menopause and the effect of rare modifying variants appear to play a role in FXPOI risk.////////////////// | ||||
Ovarian function | |||||
Comment | |||||
Expression regulated by | |||||
Comment | |||||
Ovarian localization | Oocyte | ||||
Comment | |||||
Follicle stages | |||||
Comment | |||||
Phenotypes |
PCO (polycystic ovarian syndrome) POF (premature ovarian failure) |
||||
Mutations |
1 mutations
Species: human
|
||||
Genomic Region | show genomic region | ||||
Phenotypes and GWAS | show phenotypes and GWAS | ||||
Links |
|
created: | Oct. 12, 2015, 12:58 p.m. | by: |
system email:
home page: |
last update: | May 22, 2021, 11:04 a.m. | by: | hsueh email: |
Click here to return to gene search form